Information for 5-TCTCVCAGCTAGGGGG (Motif 3)

A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A T G C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A C T G C T G A C T A G C G T A
p-value:1e-13
log p-value:-3.180e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 21.5bp
Average Position of motif in Background53.4 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTCVCAGCTAGGGGG
---CACAGCAGGGGG-
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTCVCAGCTAGGGGG-
--DCHCAGCAGGRGGCC
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCTCVCAGCTAGGGGG-
---CACAGCGGGGGGTC
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTCVCAGCTAGGGGG-
--NCGCAGCGGGGGGTC
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TCTCVCAGCTAGGGGG--
--------GGAGGGGGAA
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCTCVCAGCTAGGGGG
---CACAGN-------
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCTCVCAGCTAGGGGG----
---TGCGCATAGGGGAGGAG
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCTCVCAGCTAGGGGG--
------TGTCAGGGGGCG
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCTCVCAGCTAGGGGG
CCACACAGCAGGAGA-
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCTCVCAGCTAGGGGG--------
----GCCASCAGGGGGCGCYVNNG
 A C G T G A T C G A C T G T A C T C G A A G T C C G T A A C T G G T A C C G A T C G T A A T C G C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G