Information for 3-AGGGGGCGCTGTTKGH (Motif 2)

G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
Reverse Opposite:
C A T G A G T C G T C A C T G A G T C A A G T C C G T A A C T G A G T C A C T G G T A C A G T C G T A C A G T C A T G C A C G T
p-value:1e-21
log p-value:-4.895e+01
Information Content per bp:1.804
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 19.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTTKGH
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AGGGGGCGCTGTTKGH
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGTTKGH
-GGNGCGNCTGTTNNN
 G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AGGGGGCGCTGTTKGH
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGGCGCTGTTKGH
NAAGGGGGCGTGGCTTN-
 A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGGGGCGCTGTTKGH
NRRGGGTCTT-------
 A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTTKGH
ANTGCGGGGGCGGN------
 A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCGCTGTTKGH
TGTCAGGGGGCG--------
 A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------AGGGGGCGCTGTTKGH
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGGGCGCTGTTKGH
AGGGGGCGGGGCTG--
 G T C A A T C G A C T G A C T G A C T G A C T G A G T C A C T G A G T C A C G T C T A G A C G T A G C T A C G T C T A G G A T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T