Information for 7-ATGGCTGCGG (Motif 14)

C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
Reverse Opposite:
A T G C T A G C C A T G T G A C G T C A A T C G T A G C T A G C C T G A G A C T
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.649
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.01%
Number of Background Sequences with motif2583.3
Percentage of Background Sequences with motif5.38%
Average Position of motif in Targets52.6 +/- 29.1bp
Average Position of motif in Background50.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATGGCTGCGG
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATGGCTGCGG
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGCTGCGG-
-TGGGTGTGGC
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G A C G T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCTGCGG
TAATGGCGGNC-
 A C G T A C G T C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGGCTGCGG--
NTGGGTGTGGCC
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G A C G T A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATGGCTGCGG
---GCTGTG-
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGGCTGCGG
TWGTCTGV--
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGGCTGCGG--
-TGGGTGTGGCN
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G A C G T A C G T
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATGGCTGCGG
--NGCTN---
 C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCTGCGG
GTTAATGGCC----
 A C G T A C G T A C G T A C G T C T G A G A C T A T C G A T C G T A G C C A G T A C T G G T A C A T C G T A C G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T