Information for 1-GGGCAGTTGGCGGAAG (Motif 1)

A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T A T G C A G T C A T C G A G T C A G T C C G T A C G T A G T A C A C G T C T A G A G T C A G T C G T A C
p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.9 +/- 27.6bp
Average Position of motif in Background58.4 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGTTGGCGGAAG
CACGGCAGTTGGTNN---
 A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGCAGTTGGCGGAAG
TGGCAGTTGG------
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGTTGGCGGAAG
NNNTGGCAGTTGGTNN---
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGCAGTTGGCGGAAG
TGGCAGTTGN------
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCAGTTGGCGGAAG
-AACAGATGGC-----
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGCAGTTGGCGGAAG
-GGCVGTTR-------
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGTTGGCGGAAG
VNAVCAGCTGGC-----
 A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGCAGTTGGCGGAAG-
-----BTKGGCGGGAAA
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GGGCAGTTGGCGGAAG--
--------AGCGGAAGTG
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGGCAGTTGGCGGAAG
------TTGGCA----
 A C T G A C T G A C T G A G T C G T C A A C T G C G A T C G A T A C T G A C T G A T G C C T A G A T C G C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T