p-value: | 1e-10 |
log p-value: | -2.396e+01 |
Information Content per bp: | 1.879 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 11.9 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 40.8 +/- 24.7bp |
Average Position of motif in Background | 44.5 +/- 36.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTCGTGCATA--- ---ATGMATATDC |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCGTGCATA----- AAAATATGCATAATAAA |
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PB0096.1_Zfp187_1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTCGTGCATA- TTATTAGTACATAN |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCGTGCATA--- TTAGGTCGTAAAATTTC |
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PB0179.1_Sp100_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCGTGCATA-- TCCGTCGCTTAAAAG |
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ARNT::HIF1A/MA0259.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCGTGCATA GGACGTGC--- |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCGTGCATA--- TAAGGTCGTAAAATCCT |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTCGTGCATA--- ---ATGAATATTC |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCGTGCATA-- TAAAGTCGTAAAATAG |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCGTGCATA-- TAAAGTCGTAAAACGT |
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