Information for 17-CYGATGGGTGRSR (Motif 36)

A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G
Reverse Opposite:
A G T C A T C G A G T C A G T C C G T A A G T C A G T C A G T C C G T A C G A T A G T C C T G A C T A G
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.5 +/- 23.2bp
Average Position of motif in Background50.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf1/MA0493.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CYGATGGGTGRSR--
----TGGGTGTGGCN
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CYGATGGGTGRSR-
----TGGGTGTGGC
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CYGATGGGTGRSR
ATGATKGATGRC-
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CYGATGGGTGRSR--
---NTGGGTGTGGCC
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CYGATGGGTGRSR
NNNNNATTGATGNGTGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CYGATGGGTGRSR----
GTATTGGGTGGGTAATT
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CYGATGGGTGRSR-
----TGGGTGGGGC
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T
A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CYGATGGGTGRSR
AGAGTGCTGATTGGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CYGATGGGTGRSR-
----GGGGNGGGGC
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CYGATGGGTGRSR--
CTGATTGGTCNATTT
 A G T C A G C T A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C T G C T A G A T G C C T A G A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T