Information for 15-CCCGCAGCGGCTTTTT (Motif 25)

A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
Reverse Opposite:
T G C A G T C A C T G A C G T A C T G A T C A G A G T C G A T C C A T G A T G C G C A T A C T G A T G C C A T G A C T G T C A G
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.704
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.4 +/- 18.8bp
Average Position of motif in Background42.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCGCAGCGGCTTTTT
CTCAGCAGCTGCTACTG
 A C G T A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCGCAGCGGCTTTTT
--CGCAGCTGCG----
 A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCGGCTTTTT
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCGGCTTTTT
GACCCCCCGCTGCGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCCGCAGCGGCTTTTT
CCTGCTGAGH------
 A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCCGCAGCGGCTTTTT
-NNGCAGCTGTC----
 A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCCGCAGCGGCTTTTT
TCCCCTGGGGAC----
 A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCCGCAGCGGCTTTTT
--AGCAGCTGCT----
 A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCGGCTTTTT
GACCCCCCGCTGTGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCGGCTTTTT
AAATTCCCCCCGGAAGT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C A T C G A G T C C G T A A T C G G A T C C A T G T A C G A G T C A G C T A C G T A G C T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T A C G T A C G T A C G T