Information for 5-GACTAGTTTA (Motif 22)

T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A
Reverse Opposite:
C G A T T C G A C T G A G T C A A G T C A G C T T C G A T A C G A G C T A T G C
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.632
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif9.76%
Number of Background Sequences with motif1839.4
Percentage of Background Sequences with motif3.79%
Average Position of motif in Targets50.5 +/- 27.1bp
Average Position of motif in Background50.7 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACTAGTTTA--
TTGCCCGGATTAGG
 A C G T A C G T T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACTAGTTTA--
NWTGATTRGRTTAWN
 A C G T A C G T A C G T T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GACTAGTTTA--
----GGATTAGC
 T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACTAGTTTA
TGATTAAATTA
 A C G T T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACTAGTTTA-
AAGAGGATTAG
 T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACTAGTTTA-
---RGGATTAR
 T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GACTAGTTTA-
---NGGATTAA
 T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GACTAGTTTA-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACTAGTTTA-
NTGATTAAATTAN
 A C G T A C G T T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GACTAGTTTA-
---GGGATTAA
 T A C G T C G A A T G C A G C T C T G A A C T G C A G T G A C T A G C T C G T A A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A