Information for 11-AAAVCTACATTCAACV (Motif 18)

C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
Reverse Opposite:
A C G T C A T G A C G T C G A T A C T G C T G A G T C A A C G T A T C G A C G T C G T A A C T G A T G C A C G T A C G T A G C T
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 30.7bp
Average Position of motif in Background63.2 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAAVCTACATTCAACV
AAACAAACATTC----
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAAVCTACATTCAACV
-----CACATTCCAT-
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAAVCTACATTCAACV
-----CACATTCCAT-
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAAVCTACATTCAACV-
-NNCATTCATTCATNNN
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AAAVCTACATTCAACV
-------NATTCAAAT
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AAAVCTACATTCAACV
------ACATTCCA--
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:forward strand
Alignment:AAAVCTACATTCAACV
------CCAATCAA--
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AAAVCTACATTCAACV
-----AAAAGTCAA--
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---AAAVCTACATTCAACV
ACGAAAGCGAAAGT-----
 A C G T A C G T A C G T C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:AAAVCTACATTCAACV-
--ATTTGCATACAATGG
 C T G A G T C A C G T A T A C G G T A C C G A T G T C A A T G C C G T A A C G T A G C T A G T C C G T A C G T A G T A C T C G A A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G