Information for 10-TTYTTKAAGAAAKCAG (Motif 17)

A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T C T A G G T A C C G A T A C G T A C G T A G T C C G A T A G C T G T A C C T G A C G T A C T G A C G T A C G T A
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 27.1bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTYTTKAAGAAAKCAG
-TTTCTNAGAAAN---
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTYTTKAAGAAAKCAG
TCTTTCGAGGAATTTG-
 A C G T A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTYTTKAAGAAAKCAG----
---AAGGCGAAATCATCGCA
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTYTTKAAGAAAKCAG
NNTNANAACAATTNNA
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TTYTTKAAGAAAKCAG
GNATTTTTTTTTTGANC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TTYTTKAAGAAAKCAG
NGCTTTCTAGGAAN----
 A C G T A C G T A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTYTTKAAGAAAKCAG
TACTGGAAAAAAAA--
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTYTTKAAGAAAKCAG
---ATGCATAATTCA-
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TTYTTKAAGAAAKCAG--
-ATAAGAACAAAGGACTA
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TTYTTKAAGAAAKCAG
CTCATTAATTATGCAT
 A C G T C G A T A G C T A C G T A G C T A C G T C T G A C G T A T A C G C G T A C G T A G C T A A C T G A G T C C G T A C T A G
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T