Information for 6-GTCCGTTTCCGWG (Motif 12)

A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
Reverse Opposite:
G T A C G C A T T A G C C T A G A C T G C G T A G T C A C G T A A G T C A T C G C A T G G T C A T A G C
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.716
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 29.2bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGTTTCCGWG---
NTNNCGTATCCAAGTNN
 A C G T A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCCGTTTCCGWG---
--NNNTTTCCTGGAAA
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCCGTTTCCGWG
ACTTTCGTTTCT---
 A C G T A C G T A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTCCGTTTCCGWG--
----ATTTCCAAGAA
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCCGTTTCCGWG
--TGGTTTCAGT-
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCGWG
---NRYTTCCGGY
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
A C G T A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCGWG
---ATTTTCCATT
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCCGTTTCCGWG
---NRYTTCCGGH
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCCGTTTCCGWG
AGTTTCAGTTTC----
 A C G T A C G T A C G T A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCCGTTTCCGWG---
----NTTTCTNAGAAA
 A T C G A C G T G A T C A T G C A C T G A C G T C A G T A C G T A G T C A G T C A T C G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A