Information for 3-GAAGGGCCTATTT (Motif 7)

A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A C T G A C T G A G T C A G T C A G T C A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.8 +/- 23.3bp
Average Position of motif in Background39.2 +/- 40.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAAGGGCCTATTT
---AGGCCTAG--
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAAGGGCCTATTT----
-------CTATTTTTGG
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAGGGCCTATTT--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAGGGCCTATTT
---AGGCCTNG--
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GAAGGGCCTATTT-----
------KCTATTTTTRGH
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAAGGGCCTATTT-----
------GCTATTTTTGGM
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAAGGGCCTATTT---
AGAGGGGATTAATTTAT
 A C G T A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAAGGGCCTATTT
---TGACCTARTT
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAAGGGCCTATTT-------
-----TTCTATTTTTAGNNN
 A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GAAGGGCCTATTT
TGGGGAAGGGCM-----
 A C G T A C G T A C G T A C G T A C T G C G T A G T C A C T A G A C T G A C T G A G T C G T A C A C G T C G T A A C G T C G A T C G A T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T