Information for 1-AAGTTGTGTT (Motif 5)

C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C C G T A A G T C C G T A C G T A A G T C C G A T A G C T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif104.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.4 +/- 18.5bp
Average Position of motif in Background51.3 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGTTGTGTT----
NNGTANTGTTTTNC
 C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTGTGTT---
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTGTGTT---
NNNTGTTGTTGTTNG
 A C G T A C G T C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGTTGTGTT--
--GCTGTGGTTT
 C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTGTGTT-----
NNNNTTGTGTGCTTNN
 A C G T C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGTTGTGTT--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGTTGTGTT---
-NNHTGTGGTTWN
 C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGTTGTGTT---
AAAATTGTTATGAA
 A C G T C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAGTTGTGTT--
--NNTGTGGTTT
 C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAGTTGTGTT---
---CTGTGGTTTN
 C T G A C G T A C T A G A C G T A C G T C T A G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G