Information for 5-AAAGATAGTT (Motif 13)

C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.181e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.3 +/- 25.6bp
Average Position of motif in Background54.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAGATAGTT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAGATAGTT
DCYAAAAATAGM-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGATAGTT-
AAGGATATNTN
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAAGATAGTT
GCTAAAAATAGC-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAGATAGTT
CCAAAAATAG--
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAAGATAGTT
KCCAAAAATAGC-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAGATAGTT
AGAAACGAAAGT-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAAGATAGTT-
----ATTGTTA
 C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGATAGTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAGATAGTT
TCTAAAAATAGA-
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T