p-value: | 1e-11 |
log p-value: | -2.638e+01 |
Information Content per bp: | 1.643 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 9.18% |
Number of Background Sequences with motif | 118.5 |
Percentage of Background Sequences with motif | 0.24% |
Average Position of motif in Targets | 45.9 +/- 25.7bp |
Average Position of motif in Background | 48.1 +/- 25.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGAAABCCGCACCVC GGGAAATCCCCN---- |
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NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGAAABCCGCACCVC GGGGGAATCCCC----- |
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MF0003.1_REL_class/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGAAABCCGCACCVC -GGAAATCCCC----- |
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NFKB2/MA0778.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGAAABCCGCACCVC AGGGGAATCCCCT---- |
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NFKB1/MA0105.4/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGAAABCCGCACCVC AGGGGAATCCCCT---- |
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REL/MA0101.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGAAABCCGCACCVC -GGAAANCCCC----- |
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RELA/MA0107.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGAAABCCGCACCVC -GGAAATTCCC----- |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGGAAABCCGCACCVC NNNNTTGGGCACNNCN------ |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGAAABCCGCACCVC CSTGGGAAAD--------- |
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PH0015.1_Crx/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGAAABCCGCACCVC AGGCTAATCCCCAANG- |
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