Information for 15-GGCTGATCTA (Motif 18)

A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
Reverse Opposite:
G C A T T C G A A T C G G T C A G C A T A G T C G T C A A C T G A T G C A T G C
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.686
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif857.7
Percentage of Background Sequences with motif1.79%
Average Position of motif in Targets53.2 +/- 26.4bp
Average Position of motif in Background50.2 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTGATCTA
-GCTGTG---
 A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTGATCTA
NGCTN-----
 A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGATCTA
NNNANTGA----
 A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCTGATCTA--
--CTGTTCCTGG
 A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTGATCTA
CCTGCTGAGH--
 A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGATCTA
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCTGATCTA
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCTGATCTA
TWGTCTGV----
 A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGATCTA
ATCAGCTGTT---
 A C G T A C G T A C G T A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCTGATCTA--
--ATGATGCAAT
 A T C G T A C G G T A C A C G T A C T G C G T A A C G T A T G C A G C T C G T A A C G T A C G T
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T