Information for 7-GGACWGAGTGTCC (Motif 13)

C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C
Reverse Opposite:
A C T G T A C G T G C A A T G C G T C A A G T C A G C T A T G C C G T A A C T G A C G T A T G C G A T C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.697
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif169.7
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets49.0 +/- 24.2bp
Average Position of motif in Background50.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGACWGAGTGTCC--
GRACAGWMTGTYCTB
 C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGACWGAGTGTCC--
AGNACANNNTGTNCTN
 A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGACWGAGTGTCC--
AGNACAGNCTGTTCTN
 A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGACWGAGTGTCC--
GVACAGNMTGTYCTB
 C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

NR3C2/MA0727.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGACWGAGTGTCC--
GGGAACACAATGTTCCC
 A C G T A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGACWGAGTGTCC--
GAACADWATGTTCTT
 C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGACWGAGTGTCC--
GGGTACATAATGTTCCC
 A C G T A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGACWGAGTGTCC--
GGGAACACGGTGTACCC
 A C G T A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGACWGAGTGTCC
---TTRAGTGSYK
 C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGACWGAGTGTCC
ARGAGGMCAAAATGW--
 A C G T A C G T A C G T A C G T C A T G A T C G G T C A G T A C G C A T A T C G C T G A C T A G C A G T A T C G A C G T A T G C G T A C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T