p-value: | 1e-11 |
log p-value: | -2.697e+01 |
Information Content per bp: | 1.887 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 33.2 +/- 27.3bp |
Average Position of motif in Background | 42.6 +/- 36.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0178.1_Sox8_2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTKATGMATRAC NNTNTCATGAATGT- |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTKATGMATRAC-- TNNATTATGCATANNTT |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTKATGMATRAC -ATGATKGATGRC |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTKATGMATRAC- --TGATTRATGGCY |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTKATGMATRAC- ----ATGAATATTC |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTKATGMATRAC- ----ATGMATATDC |
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BATF::JUN/MA0462.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGTKATGMATRAC -GAAATGACTCA- |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTKATGMATRAC CTTTGTTATGCAAAT- |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTKATGMATRAC--- NTTNTATGAATGTGNNC |
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PH0150.1_Pou4f3/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTKATGMATRAC--- AGTTATTAATGAGGTC |
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