Information for 7-HGACTGCCACCTA (Motif 9)

G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
Reverse Opposite:
C G A T C G T A A C T G A T C G A C G T A C T G A C T G A G T C G T C A A C T G G A C T A G T C C A T G
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.6 +/- 29.0bp
Average Position of motif in Background43.1 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-HGACTGCCACCTA
CTGTCTGTCACCT-
 A C G T G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:HGACTGCCACCTA
TGTCTGDCACCT-
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:HGACTGCCACCTA-------
ANAGTGCCACCTGGTGGCCA
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:HGACTGCCACCTA
---ATGCCAACC-
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:HGACTGCCACCTA-
--GCGACCACCGAA
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A A C G T
A C G T A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--HGACTGCCACCTA-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:HGACTGCCACCTA
-GGCGACCACCGA
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:HGACTGCCACCTA
----TGACACCT-
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:HGACTGCCACCTA-------
-TAGCGCCCCCTGGTGGCCA
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:HGACTGCCACCTA
---CTGCCCGCA-
 G A T C T C A G C T G A A G T C A C G T A C T G A G T C A G T C G T C A T A G C A G T C C G A T C G T A
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T