Information for 8-CCWCTAGAGG (Motif 24)

G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G
Reverse Opposite:
A T G C G T A C A C G T A G T C C G A T G T C A T C A G G C A T C T A G A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.755
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif176.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets46.0 +/- 25.0bp
Average Position of motif in Background47.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCWCTAGAGG------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCWCTAGAGG-------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCWCTAGAGG---------
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCWCTAGAGG---
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCWCTAGAGG-
-BTBRAGTGSN
 G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCWCTAGAGG-
-CTYRAGTGSY
 G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CCWCTAGAGG
NAGNTCTCGCGAGAN-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCWCTAGAGG--
--TTGAGTGSTT
 G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCWCTAGAGG
CCACTTGAA-
 G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCWCTAGAGG--
-----AGAGGAA
 G T A C A G T C C G T A A G T C C A G T C G T A A C T G C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A