Information for 17-TTTGAAATAGAGCCTA (Motif 23)

A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G T A G C A C G T A G T C C G A T C G T A A C G T A G C T A C G T A G T C C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 28.3bp
Average Position of motif in Background62.6 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTGAAATAGAGCCTA
TTTGAAACCG------
 A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATAGAGCCTA
CCTTTGATGT--------
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAATAGAGCCTA
ATTTGAATT--------
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTTGAAATAGAGCCTA
NNTTCCTTTGATCTANA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTTGAAATAGAGCCTA
---GAAACTGAAACT-
 A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TTTGAAATAGAGCCTA
NNTTCCTTTGATCTNNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATAGAGCCTA
CCTTTGAWGT--------
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAATAGAGCCTA
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTTGAAATAGAGCCTA
CCAAAAATAG------
 A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAATAGAGCCTA
NNNTTTNTAATACNG----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C T G A C G T A G C A T C G T A A C T G C G T A A T C G G T A C A G T C A C G T C G T A
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T A C G T A C G T