Information for 9-AAGCAAAGGTCAT (Motif 18)

C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
Reverse Opposite:
G T C A C G A T A C T G G C T A A G T C G T A C A C G T A C G T A C G T T C A G G A T C A C G T A C G T
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets28.1 +/- 13.4bp
Average Position of motif in Background43.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAGCAAAGGTCAT
ANGNAAAGGTCA-
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGCAAAGGTCAT---
TCTCAAAGGTCACGAG
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAGCAAAGGTCAT---
TCTCAAAGGTCACCTG
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAGCAAAGGTCAT
---CAAAGGTCAG
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAGCAAAGGTCAT---
---CAAAGGTCAAGGG
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGCAAAGGTCAT----
TATTCAAGGTCATGCGA
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AAGCAAAGGTCAT
---TCAAGGTCAN
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

RARA(var.2)/MA0730.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAGCAAAGGTCAT
AGGTCATGCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
T C G A A C T G A C T G A C G T G A T C T G C A G A C T A T C G A G T C C G T A T C G A T C G A C A T G A C T G A C G T A T G C C T G A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAGCAAAGGTCAT
---TCAAGGTCAT
 C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGCAAAGGTCAT
AGGTCAACTAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A G T C C G T A G T C A C G T A A C T G A C T G C A G T A G T C C G T A A C G T
T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A A C G T