Information for 6-AAAAAAAARAAAAAAA (Motif 11)

C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
Reverse Opposite:
G A C T G A C T A G C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T A G C T A G C T G A C T G A C T A G C T G A C T
p-value:1e-2
log p-value:-5.840e+00
Information Content per bp:1.664
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif6.53%
Number of Background Sequences with motif1498.3
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets47.7 +/- 17.6bp
Average Position of motif in Background49.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAARAAAAAAA
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAAAAAARAAAAAAA
--AAATAAGAAAAAAC
 C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAARAAAAAAA
TACTGGAAAAAAAA-------
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAAAAAARAAAAAAA
AACAAACAACAAGAG-
 C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAAAAARAAAAAAA
NNCCTGNAAAAAAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAAAARAAAAAAA----
AAANNGAAAGTGAAAGTAAAN
 A C G T C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAAAAARAAAAAAA
NNCCTGNAAAAAAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAAAAARAAAAAAA
CAAAAGTAAACAAAG-
 C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAAAAAARAAAAAAA----
AGTAAACAAAAAAGAACANN
 C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A A C G T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAAAAAARAAAAAAA
-AGAAAGTGAAAGTGA
 C T G A C T G A C T G A C T G A T C G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A