Information for 7-AACTATGTGA (Motif 7)

C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C G T C G A T
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 9.0bp
Average Position of motif in Background65.3 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AACTATGTGA
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AACTATGTGA
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AACTATGTGA
GTTAACTAGN---
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACTATGTGA
NAACAAT----
 A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACTATGTGA--
-GTCATGTGACC
 C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A A C G T A C G T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACTATGTGA
AAYTAGGTCA
 C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AACTATGTGA---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AACTATGTGA
GAACAATGG--
 A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AACTATGTGA----
GANTATTATGGGATGGA
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACTATGTGA-
TATAAGTAGGTCAA
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C T G C G A T A C T G C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A