Information for 2-GGTGCATGTA (Motif 8)

T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A
Reverse Opposite:
A G C T T C G A G A T C C T G A A G C T C T A G A G T C G T C A T A G C A T G C
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.664
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif9.55%
Number of Background Sequences with motif1464.5
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets55.9 +/- 25.4bp
Average Position of motif in Background50.0 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
AATATACATGTAATATA
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
TAAATACATGTAAAATT
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
AAAATACATGTAATACT
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
AAAATACATGTAAAAAT
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
AATATACATGTAAAACA
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTGCATGTA-----
AATATACATGTAAAATT
 A C G T A C G T T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGTGCATGTA-
---GCACGTAY
 T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTGCATGTA
--BGCACGTA
 T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTGCATGTA---
---GCACGTACCC
 T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTGCATGTA-
-TTGCGTGCVA
 T A C G A T C G C A G T T C A G G A T C T C G A G A C T C T A G A G C T T C G A A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A