Information for 9-CCAGGCGGGC (Motif 34)

A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C
Reverse Opposite:
C T A G A T G C A G T C G T A C C T A G A G T C A G T C A G C T A T C G A T C G
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif109.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.6 +/- 28.1bp
Average Position of motif in Background48.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCAGGCGGGC-
---GGCGCGCT
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCAGGCGGGC-
-CWGGCGGGAA
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCAGGCGGGC-
-TATGCGGGTA
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGGCGGGC--
BTKGGCGGGAAA
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCGGGC---
TCCCAGMCRAGCCCC
 A C G T A C G T A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCAGGCGGGC---
--GGGCGGGAAGG
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCAGGCGGGC-
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGGCGGGC---
--GGGCGGGAAGG
 A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCGGGC----
NNNNATGCGGGTNNNN
 A C G T A C G T A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGCGGGC----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A T G C A T G C C T G A A C T G A C T G A G T C C A T G A C T G A T C G A G T C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A