p-value: | 1e-8 |
log p-value: | -2.046e+01 |
Information Content per bp: | 1.795 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.67% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 34.2 +/- 23.8bp |
Average Position of motif in Background | 65.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CHCCTGGGGTTTACAA -----NGGGATTA--- |
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EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CHCCTGGGGTTTACAA GTCCCCAGGGGA------ |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CHCCTGGGGTTTACAA-- -TTAGAGGGATTAACAAT |
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Znf423/MA0116.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CHCCTGGGGTTTACAA GGCACCCAGGGGTGC--- |
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PITX3/MA0714.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CHCCTGGGGTTTACAA ------GGGATTANN- |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CHCCTGGGGTTTACAA ------GGGATTAA-- |
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PH0129.1_Otx1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CHCCTGGGGTTTACAA--- --AGAGGGGATTAATTTAT |
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MF0003.1_REL_class/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CHCCTGGGGTTTACAA -----GGGGATTTCC- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CHCCTGGGGTTTACAA -----VRGGATTARN- |
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EBF1/MA0154.3/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CHCCTGGGGTTTACAA ANTCCCTNGGGAAT---- |
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