Information for 2-GACAGCCCGGGGT (Motif 5)

C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T
Reverse Opposite:
T G C A A G T C A G T C A T G C A G T C A C T G A C T G A T C G A G T C A G C T A C T G G A C T A G T C
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.12%
Number of Background Sequences with motif44.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.9 +/- 19.8bp
Average Position of motif in Background50.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GACAGCCCGGGGT---
--CAGGCCNNGGCCNN
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACAGCCCGGGGT--
-ACATGCCCGGGCAT
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACAGCCCGGGGT---
--NTGCCCANNGGTNA
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GACAGCCCGGGGT--
NCCCCCCCGGGGGGN
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACAGCCCGGGGT
TTGACAGC-------
 A C G T A C G T C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GACAGCCCGGGGT
CACAGN-------
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GACAGCCCGGGGT--
---TGCCCNGGGGCA
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GACAGCCCGGGGT--
ACCCCCCCGGGGGGN
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GACAGCCCGGGGT
VBTGWCAGCB------
 A C G T A C G T A C G T C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GACAGCCCGGGGT
---AGGCCTNG--
 C T A G C T G A A G T C C T G A C T A G T A G C A G T C A G T C T C A G A T C G C T A G C T A G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T