Information for 5-AAGYTCRTGC (Motif 18)

C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G C T G A C T G A A G T C C G A T C G A T
p-value:1e-4
log p-value:-1.080e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif161.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets39.3 +/- 24.9bp
Average Position of motif in Background53.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGYTCRTGC
--GGACGTGC
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGYTCRTGC
--RTACGTGC
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAGYTCRTGC----
--GCGCATGCGCAC
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGYTCRTGC--
--TTGCGTGCVA
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGYTCRTGC----
--GCGCATGCGCAG
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGYTCRTGC
GGGTACGTGC
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGYTCRTGC-
-NNCGCGTGNN
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGYTCRTGC-
---TACGTGCV
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGYTCRTGC---
--GCGCCTGCGCA
 C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAGYTCRTGC--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G C T A G C T G T A C C T A G A C G T A C T G A G T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A