Information for 11-GAGACAACAAAAA (Motif 17)

A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.949
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 26.7bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGACAACAAAAA
ATGTCACAACAACAC
 A C G T A C G T A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGACAACAAAAA--
-AAATAAGAAAAAAC
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T A C G T
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGACAACAAAAA-
AAGATAAGATAACA
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGACAACAAAAA--
CAAACAACAACACCT
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGACAACAAAAA-
AAAAATAACAAACGG
 A C G T A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGACAACAAAAA----
AGAAGAACAAAGGACTA
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAACAAAAA
NTTNAGAACAATTA
 A C G T A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGACAACAAAAA
AACAAACAACAAGAG
 A C G T A C G T A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAGACAACAAAAA
-----AACAAT--
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGACAACAAAAA----
GTTAAAAAAAAAAATTA
 A C T G C G T A A C T G C G T A A G T C C G T A G T C A A G T C C G T A C G T A C G T A G T C A G T C A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T