Information for 8-TTCTAAGGGCAHATGT (Motif 9)

C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
Reverse Opposite:
C G T A A T G C G T C A G C A T C A G T A C G T A C T G A G T C G T A C G A T C A C G T A C G T C G T A C T A G C G T A C G T A
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.772
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.1 +/- 20.6bp
Average Position of motif in Background46.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCTAAGGGCAHATGT-
NTNTATGTGCACATNNN
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTCTAAGGGCAHATGT
--CTAATKGV------
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTCTAAGGGCAHATGT
--CAAAGGTCAG----
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTCTAAGGGCAHATGT--
----TAGGGCAAAGGTCA
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTCTAAGGGCAHATGT
--TTAAGTGC------
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCTAAGGGCAHATGT
---TNNGGGCAG----
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TTCTAAGGGCAHATGT
--------CCATATGT
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TTCTAAGGGCAHATGT-
-------GACATATGTT
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTCTAAGGGCAHATGT
AGNGTTCTAATGANN-----
 A C G T A C G T A C G T A C G T C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTCTAAGGGCAHATGT
---TRAGGTCA-----
 C G A T C G A T G A T C G C A T G T C A C G T A C T A G A C T G A C T G G T A C C G T A G C T A C G T A C A G T A T C G A C G T
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T