Information for 3-GCTWTCARCCMRC (Motif 5)

A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A G C T C G A T A C T G C G T A C G T A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 11.9bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTWTCARCCMRC
SCTGTCARCACC-
 A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTWTCARCCMRC
GCTGTCAA-----
 A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTWTCARCCMRC
-CNGTCACGCCAC
 A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTWTCARCCMRC
GSCTGTCACTCA--
 A C G T A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTWTCARCCMRC
TGGTTTCAGT----
 A C G T A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTWTCARCCMRC
AACTAGCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTWTCARCCMRC
NCTGTCAATCAN-
 A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTWTCARCCMRC
VGCTGWCAVB----
 A C G T A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTWTCARCCMRC
---ATCACCCCAC
 A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTWTCARCCMRC
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G A G T C A C G T C G A T A C G T A G T C C G T A C T G A A G T C A G T C G T C A C T A G A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T