Information for 3-KTCTAAMTGA (Motif 27)

A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
Reverse Opposite:
A G C T T A G C C G T A A C T G A G C T A C G T C G T A A C T G C G T A T G C A
p-value:1e-5
log p-value:-1.238e+01
Information Content per bp:1.731
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif523.1
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets49.0 +/- 26.1bp
Average Position of motif in Background47.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------KTCTAAMTGA-
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KTCTAAMTGA-
-GCTAATTGCT
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KTCTAAMTGA-----
GTATAAAAGGCGGGG
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KTCTAAMTGA-----
GTATAAAAGGCGGGG
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KTCTAAMTGA
--CTAATKGV
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KTCTAAMTGA
--NTAATTGN
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KTCTAAMTGA
--TTAAGTGC
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----KTCTAAMTGA
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:KTCTAAMTGA
RYHYACCTGB
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

LBX2/MA0699.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KTCTAAMTGA-
-NNTAATTGGN
 A C G T A C G T G T A C A C G T C G T A T C G A G T A C A C G T A T C G T C G A A C G T
A C G T A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C