Information for 15-CCATCCATTCTTCTGC (Motif 25)

A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C A T G C T G A C G T A C T A G G T C A C G T A A C G T A C T G A C T G C G T A C G A T A C T G A C T G
p-value:1e-5
log p-value:-1.331e+01
Information Content per bp:1.904
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.2 +/- 24.4bp
Average Position of motif in Background36.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCATCCATTCTTCTGC
---NCCATTGTTC---
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCATCCATTCTTCTGC
----CCATTGTTYB--
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCATCCATTCTTCTGC
----CCATTGTTC---
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCATCCATTCTTCTGC
---NCCATTGTTY---
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCATCCATTCTTCTGC
NNCATTCATTCATNNN-
 A C G T A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCATCCATTCTTCTGC
----CCATTGTTTT--
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCATCCATTCTTCTGC
CCTTCCTTCCTTCCTTCC--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCATCCATTCTTCTGC
ANNTCCATTGTTCNNN
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCATCCATTCTTCTGC--
-CNNNTATTGTTCNNNNN
 A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCATCCATTCTTCTGC
NNGCACCTTTCTCC---
 A C G T A G T C A G T C C G T A A C G T A G T C A G T C C G T A C G A T A C G T A G T C A C G T A G C T G T A C A C G T A C T G A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T