Information for 13-ATKAAAGWSTRATTTA (Motif 23)

C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
Reverse Opposite:
G C A T C G T A G T C A T G C A C G A T G A T C G T C A A T G C G C A T G A T C C G A T C G A T C A G T G T C A G C T A G A C T
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.621
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.94%
Number of Background Sequences with motif593.6
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets51.0 +/- 24.8bp
Average Position of motif in Background52.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATKAAAGWSTRATTTA
ATTAAA----------
 C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATKAAAGWSTRATTTA
NGCAATTAAA----------
 A C G T A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATKAAAGWSTRATTTA
NCYAATAAAA----------
 A C G T A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATKAAAGWSTRATTTA
GCAATAAAAA---------
 A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATKAAAGWSTRATTTA
-AGAAAGTGAAAGTGA
 C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATKAAAGWSTRATTTA
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATKAAAGWSTRATTTA--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATKAAAGWSTRATTTA
AAAGATCAAAGGAA------
 A C G T A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATKAAAGWSTRATTTA
--GAAAGTGAAAGT--
 C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATKAAAGWSTRATTTA
GGTAATAAAAA---------
 A C G T A C G T A C G T A C G T C G T A C G A T C A G T G C T A C G T A C G T A C T A G C G T A A T C G C A G T C T A G C G T A A C G T A C G T G C A T C G T A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T