Information for 13-CCCAGAGACCGGC (Motif 21)

A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C T G A C G T A T G C A C G T A T G C C G A T C T A G A C T G A C T G
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.922
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 25.8bp
Average Position of motif in Background54.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCAGAGACCGGC
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGAGACCGGC
TCCCNNGGGACN---
 A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCAGAGACCGGC-
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGAGACCGGC
TCCCCTGGGGAC---
 A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGAGACCGGC
GGTTAGAGACCT--
 A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCCAGAGACCGGC
SCCTAGCAACAG--
 A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCCAGAGACCGGC--
-----AAACCGGTTT
 A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGAGACCGGC
TGCCCAGNHW-----
 A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCCAGAGACCGGC
ATTCCCAAGGGAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCCAGAGACCGGC
-ACTGAAACCA--
 A G T C A G T C A G T C C G T A A T C G C G T A A T C G C G T A A G T C A G T C A C T G A C T G A G T C
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T