Information for 5-CTTGGCCTTAGCG (Motif 8)

A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A C G T C G T A C G T A A C T G A T C G A G T C A G T C C G T A C G T A A C T G
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.950
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 17.4bp
Average Position of motif in Background31.1 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
BNTGDCCTTG---
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
CTAGGCCT-----
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
-CTGACCTTTG--
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
-GTGACCTT----
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
--TGACCTTGAN-
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
CNAGGCCT-----
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
--TGACCTYA---
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCTTAGCG
--TGACCTTGAV-
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGCCTTAGCG
TGACCTTGACCT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTGGCCTTAGCG
-TTGGCA------
 A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T C G T A A C T G A T G C A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T