Information for 13-CTGTCCTTGGACA (Motif 25)

T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A G T C A G T C C G T A C G T A A C T G A C T G G T C A A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 32.5bp
Average Position of motif in Background29.9 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGGACA-
NTGCCCTTGGGCGN
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTGGACA
-TGACCTTGAN--
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGGACA
CTGTTCCTGG---
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTGGACA-
GCTGACCTTGAACTN
 A C G T T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTGGACA
BNTGDCCTTG----
 A C G T T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTGGACA
-TGACCTTGAV--
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGGACA
CTGACCTTTG---
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGGACA-
NTGCCCANNGGTNA
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTGGACA
-TGCCCTNGGGCA
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTCCTTGGACA
NTGACCTTGA---
 T G A C A C G T A C T G A C G T A G T C A G T C C G A T C G A T A C T G A C T G T C G A A G T C C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T