Information for 10-GCASAGKTTCMGT (Motif 20)

A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T
Reverse Opposite:
C G T A G T A C C A T G A C T G C G T A C G T A T G A C A G T C A C G T A T G C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 27.7bp
Average Position of motif in Background61.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCASAGKTTCMGT
GCAGTGATTT---
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCASAGKTTCMGT---
----AGTTTCAKTTTC
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCASAGKTTCMGT----
---CAGTTTCGNTTCTN
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCASAGKTTCMGT---
----AGTTTCAGTTTC
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCASAGKTTCMGT
TGCTGTGATTT---
 A C G T A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCASAGKTTCMGT-----
----AGTTTCGGTTTCGN
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCASAGKTTCMGT
---TGGTTTCAGT
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCASAGKTTCMGT----
--NTGGTTTCGGTTNNN
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCASAGKTTCMGT----
--TCAGTTTCATTTTCC
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCASAGKTTCMGT-
----ATTTTCCATT
 A C T G A G T C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A G T C G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T