Information for 25-TGCTCTGTCTCACACC (Motif 35)

A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A C T G A G T C C G T A
p-value:1e-3
log p-value:-7.755e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 24.4bp
Average Position of motif in Background47.1 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TGCTCTGTCTCACACC-
----CTGTCTGTCACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
-----TGTCTGDCACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.63
Offset:9
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
---------TCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
---------TCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
---------TCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC
-GCTCGGSCTC-----
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
---------TCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
---------TCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC--
-------TTTCACACCTN
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGCTCTGTCTCACACC-
-------TTTCACACCT
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T