Information for 7-GAACAAGTTC (Motif 9)

A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
Reverse Opposite:
T C A G C G T A C T G A A T G C A C G T A C G T A T C G A C G T A C G T T A G C
p-value:1e-10
log p-value:-2.352e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif55.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets60.0 +/- 26.1bp
Average Position of motif in Background50.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAACAAGTTC
-AACAAT---
 A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGTTC---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGTTC--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGTTC--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGTTC
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGTTC--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGTTC--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGTTC
NTTNAGAACAATTA-
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACAAGTTC
GTAAACAAT---
 A C G T A C G T A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAACAAGTTC
AAACCGGTTT
 A T C G G T C A C G T A A T G C C G T A C G T A A T C G G A C T A C G T A G T C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T