Information for 5-AGGGGGCAGTGTT (Motif 3)

G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A G T C A G A T C C G T A A G T C A C G T A C T G G T A C A T G C G T A C A G T C A G T C C G A T
p-value:1e-18
log p-value:-4.168e+01
Information Content per bp:1.844
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif43.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.7 +/- 21.4bp
Average Position of motif in Background50.9 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCAGTGTT
TGTCAGGGGGCG-----
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------AGGGGGCAGTGTT
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCAGTGTT
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGGGCAGTGTT
TNNGGGCAG----
 G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGGGCAGTGTT
AGGVNCCTTTGT-
 G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCAGTGTT
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGGGGCAGTGTT--
NNNNTGCCAGTGATTG
 A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCAGTGTT
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGGGCAGTGTT-
AGGGGGCGGGGCTG
 G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCAGTGTT
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C T G A T C G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A