Information for 7-TGTGCATGTGGCTGAC (Motif 13)

A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.8 +/- 15.3bp
Average Position of motif in Background11.1 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGTGCATGTGGCTGAC
GGAGCTGTCCATGGTGCTGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGTGCATGTGGCTGAC
----CACGTGGC----
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCATGTGGCTGAC
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGTGCATGTGGCTGAC
---CCATGTGCTT---
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTGCATGTGGCTGAC
--TGGGTGTGGC----
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGTGCATGTGGCTGAC
--GTCATGTGACC---
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGTGCATGTGGCTGAC-
-----AAAATGCTGACT
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGTGCATGTGGCTGAC-
-----AGGTGHCAGACA
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTGCATGTGGCTGAC
---CCACGTGGNN---
 A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTGCATGTGGCTGAC
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C T G C G T A A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T