Information for 6-CACCAWCCTSCAGCCR (Motif 6)

A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
Reverse Opposite:
A G C T A C T G T A C G A G T C A C G T A C T G A T G C C T G A A T C G A C T G G C T A A C G T A C T G T C A G C G A T A C T G
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif31.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets37.3 +/- 22.0bp
Average Position of motif in Background54.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:1
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CACCAWCCTSCAGCCR
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CACCAWCCTSCAGCCR
TCCCCCCCCCCCCCC--
 A C G T A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:CACCAWCCTSCAGCCR-
---------CCAGACAG
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:CACCAWCCTSCAGCCR---
---------CCAGACRSVB
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:CACCAWCCTSCAGCCR-
---------BCAGACWA
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.47
Offset:4
Orientation:forward strand
Alignment:CACCAWCCTSCAGCCR-----
----CAAATCCAGACATCACA
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CACCAWCCTSCAGCCR
--------CACAGN--
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CACCAWCCTSCAGCCR
-CCCCTCCCCCAC---
 A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---CACCAWCCTSCAGCCR
NNGCACCTTTCTCC-----
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CACCAWCCTSCAGCCR
ACCACATCCTGT-----
 A C G T A G T C C G T A A G T C A G T C T G C A C G A T G T A C A T G C G A C T A T C G A G T C G T C A A C T G A G T C G T A C C T G A
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T