Information for 2-GGAGCCATGGAAGGTT (Motif 2)

A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A G T A C A G T C C G A T A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A G T C A G T C
p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 5.0bp
Average Position of motif in Background23.0 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:-9
Orientation:reverse strand
Alignment:---------GGAGCCATGGAAGGTT
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCATGGAAGGTT
CGGAGC-----------
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCATGGAAGGTT
NGTTGCCATGGCAA---
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCATGGAAGGTT
GGTTGCCATGGCAA---
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGAGCCATGGAAGGTT
--TNCCATATATGG--
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GGAGCCATGGAAGGTT
GGAAGGAAGGAAGGAAGG--
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GGAGCCATGGAAGGTT
GTTGCCATGGNAAC--
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GGAGCCATGGAAGGTT
------NTGGAATGTG
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------GGAGCCATGGAAGGTT
NNNNTTGGCGCCGANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GGAGCCATGGAAGGTT
-------TGGAATGT-
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A G A C T C T A G A C T G G T C A C G T A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T