Information for 7-AAGATTTACAACT (Motif 14)

C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T
Reverse Opposite:
C G T A C A T G C G A T C G A T A C T G C A G T G T C A T C G A G C T A G A C T G A T C G C A T G A C T
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.690
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif286.1
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets58.3 +/- 21.9bp
Average Position of motif in Background48.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0047.1_Hoxa11/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGATTTACAACT---
NNGTTTTACGACTTTA
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTTACAACT---
GNNNTTTTACGACCTNA
 A C G T C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGATTTACAACT
--NTTTTACGACT
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTTACAACT---
NNNATTTTACGACNNTN
 A C G T C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAGATTTACAACT---
ANNTTTTACGACNTNN
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGATTTACAACT---
NNNTTTTACGACNTTN
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGATTTACAACT
--NTTTTACGACC
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGATTTACAACT
--NTTTTACGAC-
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTTACAACT---
ANNATTTTACGACNTNA
 A C G T C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGATTTACAACT
NTGATTTATGGCC
 C G T A C G T A C T A G C G T A C G A T A G C T A C G T G C T A G T A C C G T A C G T A G T A C C G A T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C