Information for 1-GTGAAATGAG (Motif 10)

C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
Reverse Opposite:
T G A C G A C T A T G C C T G A C G A T A C G T A G C T A T G C T C G A G A T C
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.663
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.89%
Number of Background Sequences with motif760.3
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets52.3 +/- 25.1bp
Average Position of motif in Background51.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGAG----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGAG
NNTGTGGATTSS-
 A C G T A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAATGAG
TGTGGATTNNN
 A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGAAATGAG
ACTGAAACCA-
 A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGAAATGAG--
GTGACGTCACCG
 C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G A C G T A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGAAATGAG
NATTGTGCAAT---
 A C G T A C G T A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------GTGAAATGAG
GAAAAGGTGTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGAAATGAG
NGRTGACGTCAY
 A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGAAATGAG
NRRTGACGTCAT
 A C G T A C G T C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGAAATGAG--
GWAAYHTGABMC
 C T A G A G C T T A C G T C G A T G C A G C T A G A C T A T C G C T G A A C T G A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C