| p-value: | 1e-9 |
| log p-value: | -2.186e+01 |
| Information Content per bp: | 1.859 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 1.26% |
| Number of Background Sequences with motif | 40.4 |
| Percentage of Background Sequences with motif | 0.10% |
| Average Position of motif in Targets | 51.6 +/- 26.1bp |
| Average Position of motif in Background | 39.9 +/- 40.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGAACAACCG
RNAACAATGG |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GGAACAACCG-
-GAACAATGGN |
|
|
|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---GGAACAACCG
CCAGGAACAG--- |
|
|
|
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GGAACAACCG
GGAACAAAGR |
|
|
|
PB0173.1_Sox21_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GGAACAACCG---
NNNNNGAACAATTGANN |
|
|
|
SOX9/MA0077.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GGAACAACCG
-GAACAATGG |
|
|
|
MF0011.1_HMG_class/Jaspar
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GGAACAACCG
--AACAAT-- |
|
|
|
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GGAACAACCG-
-RAACAATGGN |
|
|
|
PB0183.1_Sry_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GGAACAACCG---
TCACGGAACAATAGGTG |
|
|
|
PB0070.1_Sox30_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GGAACAACCG----
AATGAACAATGGAATT |
|
|
|
