Information for 4-AGMTGCACCTGCTCAA (Motif 4)

G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T T C A G C T G A A C T G A T G C C G T A C T A G A C T G A C G T A C T G A G T C T G C A C A T G A G T C A C G T
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.755
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 22.8bp
Average Position of motif in Background62.2 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
--SNGCACCTGCHS--
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---TACACCTGTC---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---CGCACCTGCT---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGMTGCACCTGCTCAA
----NCACCTGTN---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGMTGCACCTGCTCAA
NNNNAGCAGCTGCTGAN
 A C G T G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---AACACCTGCT---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---NNCACCTGNN---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGMTGCACCTGCTCAA
NNTNCGCACCTGTNGAN
 A C G T G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---CGCAGCTGCG---
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGMTGCACCTGCTCAA
---TGCAGCTGTCCCT
 G T C A C T A G G T A C A C G T A C T G A G T C C G T A T A G C A G T C C G A T A T C G A G T C G A C T A G T C G T C A C G T A
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T