Information for 4-ACTGCCCTCT (Motif 2)

C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T
Reverse Opposite:
C T G A C A T G T C G A C T A G T A C G A C T G G T A C G C T A C T A G G A C T
p-value:1e-26
log p-value:-6.121e+01
Information Content per bp:1.539
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif369.0
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets49.4 +/- 24.1bp
Average Position of motif in Background51.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACTGCCCTCT-
-CTGACCTTTG
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT
--TGACCYCT
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT
--TGACCTYA
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT-------
--TGACCTTTGCCCTAN
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCCCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTGCCCTCT
-CTGCCCGCA
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTGCCCTCT
ACTTCCTBGT
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T
T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTGCCCTCT--------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTGCCCTCT------
--TGACCTTTGCCCTA
 C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCCCTCT--
NNACTTCCTCTTNN
 A C G T A C G T C T G A G A T C C G A T C A T G T G A C A T G C G A T C A G C T G T A C G A C T A C G T A C G T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A